Tutorials
Hornak’s MR basics http://www.cis.rit.edu/htbooks/mri/
Henson’s fMRI http://www.mrc-cbu.cam.ac.uk/people/rik.henson/personal/analysis.html
Culham’s fMRI http://psychology.uwo.ca/fmri4newbies/
CBU Wiki http://imaging.mrc-cbu.cam.ac.uk/imaging/CbuImaging
SPM programming: http://en.wikibooks.org/wiki/SPM/Programming_intro
Software
SPM http://www.fil.ion.ucl.ac.uk/spm
FSL http://www.fmrib.ox.ac.uk/fsl/
CoSMo MVPA http://www.cosmomvpa.org/
CAMINO http://www.camino.org.uk
MARSBAR http://marsbar.sourceforge.net/
LONI software https://www.loni.usc.edu/research/software
BRAIN MAP http://www.brainmap.org/sleuth/index.html
MRICRO http://www.cabiatl.com/mricro/
GIFT (group ICA) http://icatb.sourceforge.net
fMRI Power Analysis http://fmripower.org
Atlases
Talairach Daemon http://www.talairach.org/
INM JUELICH https://www.fz-juelich.de/inm/inm-1/EN/Forschung/_docs/BrainMapping/BrainMapping_node.html
LPBA40 http://loni.usc.edu/atlases/Atlas_Detail.php?atlas_id=12
ICBM probabilistic atlases http://www.bmap.ucla.edu/portfolio/atlases/ICBM_Probabilistic_Atlases/